Deferribacteraceae

Deferribacteraceae
Scientific classification
Domain:	Bacteria
Kingdom:	Pseudomonadati
Phylum:	Deferribacterota; Garrity and Holt 2021
Class:	Deferribacteres; Huber and Stetter 2002
Order:	Deferribacterales; Huber and Stetter 2002
Family:	Deferribacteraceae; Huber and Stetter 2002
Genera
	See text
Synonyms
	Deferribacterota: "Deferribacteres" Garrity and Holt 2001; "Deferribacterota" Whitman et al. 2018; "Deferribacteraeota" Oren et al. 2015; ; Deferribacteres: Ferrobacteria Cavalier-Smith 2002; "Deferribacteria" Cavalier-Smith 2020; ; Deferribacterales: Geovibriales (sic) Cavalier-Smith 2002; ;

The Deferribacteraceae are a family of gram-negative bacteria which make energy by anaerobic respiration.^[2]

Description

Deferribacteraceae are rod-shaped, although the rods may be straight or bent. They are gram-negative. Deferribacteraceae perform anaerobic respiration using iron, manganese, or nitrate. They can also produce energy by fermentation. The type genus of the family is Deferribacter.^[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN) ^[3] ^[4]

Phylum Deferribacterota Garrity and Holt 2021
- Class Deferribacteres Huber & Stetter 2002
  - Order Deferribacterales Huber & Stetter 2002
    - Genus ?"Ca. Rimicarispirillum" Aubé et al. 2022
    - Family Calditerrivibrionaceae Spring et al. 2022
    - Family Deferribacteraceae Huber & Stetter 2002
    - Family Deferrivibrionaceae Zavarzina et al. 2023
    - Family Flexistipitaceae Spring et al. 2022
    - Family Geovibrionaceae Cavalier-Smith 2020
    - Family Mucispirillaceae Spring et al. 2022

16S rRNA based LTP_10_2024^[5]^[6]^[7]

120 marker proteins based GTDB 09-RS220^[8]^[9]^[10]

Deferribacterales

Geovibrionaceae

	Limisalsivibrio Spring et al. 2022

	Geovibrio Caccavo et al. 2000

	Denitrovibrio Myhr & Torsvik 2000

	Seleniivibrio Rauschenbach et al. 2013

Mucispirillaceae	Mucispirillum Robertson et al. 2005

Calditerrivibrionaceae	Calditerrivibrio Iino et al. 2008

Deferrivibrionaceae

	Deferrivibrio Zavarzina et al. 2023

	Petrothermobacter Tamazawa et al. 2017

Flexistipitaceae	Flexistipes Fiala et al. 2000

Deferribacteraceae	Deferribacter Greene et al. 1997

Deferribacterales

Mucispirillaceae	Mucispirillum

Geovibrionaceae

	Limisalsivibrio

	Geovibrio

	Denitrovibrio

	Seleniivibrio

Flexistipitaceae	Flexistipes

Calditerrivibrionaceae	Calditerrivibrio

Deferrivibrionaceae	Deferrivibrio

Deferribacteraceae	Deferribacter

History

The family was first described in 2001 in order to hold the genera Deferribacter, Flexistipes, and Geovibrio.^[2]

References

^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.
^ ^a ^b ^c Huber, H., and Stetter, K.O. "Family I. Deferribacteraceae fam. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466.
^ See the List of Prokaryotic names with Standing in Nomenclature. Data extracted from the "Deferribacteres". Retrieved 2013-03-20.
^ See the NCBI webpage on Deferribacteres Data extracted from the "NCBI Taxonomy Browser". National Center for Biotechnology Information. Retrieved 2013-03-20.
^ "The LTP". Retrieved 10 December 2024.
^ "LTP_all tree in newick format". Retrieved 10 December 2024.
^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.

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[1] Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.

[Bergey-2] Huber, H., and Stetter, K.O. "Family I. Deferribacteraceae fam. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466.

[3] See the List of Prokaryotic names with Standing in Nomenclature. Data extracted from the "Deferribacteres". Retrieved 2013-03-20.

[4] See the NCBI webpage on Deferribacteres Data extracted from the "NCBI Taxonomy Browser". National Center for Biotechnology Information. Retrieved 2013-03-20.

[5] "The LTP". Retrieved 10 December 2024.

[6] "LTP_all tree in newick format". Retrieved 10 December 2024.

[7] "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.

[about-8] "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.

[tree-9] "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.

[taxon_history-10] "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.

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Deferribacteraceae

Description

Phylogeny

History

See also

References

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