Armatimonadota

Armatimonadota
Scientific classification Edit this classification
Domain: Bacteria
Clade: Terrabacteria
Phylum: Armatimonadota
Tamaki et al. 2021[1]
Class
Synonyms
  • Candidate division OP10
  • "Armatimonadetes" Tamaki et al. 2011
  • "Armatimonadaeota" Oren et al. 2015
  • "Armatimonadota" Whitman et al. 2018

Armatimonadota is a phylum of gram-negative bacteria.

History

Armatimonadota was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[2]

Members

Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[2]

Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[3]

Phylogeny

16S rRNA based LTP_12_2021[4][5][6] GTDB 08-RS214 by Genome Taxonomy Database[7][8][9]
Armatimonadota
Armatimonadota
UBA5829
UBA5829
UBA5829

"Ca. Hippobium faecium"

Fimbriimonadia
Fimbriimonadales
Chthonomonadia
Chthonomonadales
Chthonomonadaceae

Chthonomonas calidirosea

Armatimonadia
Armatimonadales
Armatimonadaceae

Armatimonas rosea

Capsulimonadaceae

Capsulimonas corticalis

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[10] and National Center for Biotechnology Information (NCBI).[11]

Notes

References

  1. ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987.
  2. ^ a b Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
  3. ^ Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill; et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
  4. ^ "The LTP". Retrieved 23 February 2021.
  5. ^ "LTP_all tree in newick format". Retrieved 23 February 2021.
  6. ^ "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
  7. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  8. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2011-06-13. Retrieved 2016-03-20.
  11. ^ Sayers; et al. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.