Binding selectivity

In chemistry, binding selectivity is defined with respect to the binding of ligands to a substrate forming a complex. Binding selectivity describes how a ligand may bind more preferentially to one receptor than another. A selectivity coefficient is the equilibrium constant for the reaction of displacement by one ligand of another ligand in a complex with the substrate. Binding selectivity is of major importance in biochemistry[1] and in chemical separation processes.

Selectivity coefficient

The concept of selectivity is used to quantify the extent to which one chemical substance, A, binds each of two other chemical substances, B and C. The simplest case is where the complexes formed have 1:1 stoichiometry. Then, the two interactions may be characterized by equilibrium constants KAB and KAC.[note 1] where [X] represents the concentration of substance X (A, B, C, …).

A selectivity coefficient is defined as the ratio of the two equilibrium constants. This selectivity coefficient is in fact the equilibrium constant for the displacement reaction

It is easy to show that the same definition applies to complexes of a different stoichiometry, ApBq and ApCq. The greater the selectivity coefficient, the more the ligand C will displace the ligand B from the complex formed with the substrate A. An alternative interpretation is that the greater the selectivity coefficient, the lower the concentration of C that is needed to displace B from AB. Selectivity coefficients are determined experimentally by measuring the two equilibrium constants, KAB and KAC.

Applications

Biochemistry

In biochemistry the substrate is known as a receptor. A receptor is a protein molecule, embedded in either the plasma membrane or the cytoplasm of a cell, to which one or more specific kinds of signalling molecules may bind. A ligand may be a peptide or another small molecule, such as a neurotransmitter, a hormone, a pharmaceutical drug, or a toxin. The specificity of a receptor is determined by its spatial geometry and the way it binds to the ligand through non-covalent interactions, such as hydrogen bonding or Van der Waals forces.[2]

If a receptor can be isolated a synthetic drug can be developed either to stimulate the receptor, an agonist or to block it, an antagonist. The stomach ulcer drug cimetidine was developed as an H2 antagonist by chemically engineering the molecule for maximum specificity to an isolated tissue containing the receptor. The further use of quantitative structure-activity relationships (QSAR) led to the development of other agents such as ranitidine.

"Selectivity" when referring to a drug is relative. For example, in a higher dose, a specific drug molecule may also bind to other receptors than those said to be "selective".

Chelation therapy

Deferiprone
Penicillamine

Chelation therapy is a form of medical treatment in which a chelating ligand[note 2] is used to selectively remove a metal from the body. When the metal exists as a divalent ion, such as with lead, Pb2+ or mercury, Hg2+ selectivity against calcium, Ca2+ and magnesium, Mg2+, is essential in order that the treatment does not remove essential metals.[3]

Selectivity is determined by various factors. In the case of iron overload, which may occur in individuals with β-thalessemia who have received blood transfusions, the target metal ion is in the +3 oxidation state and so forms stronger complexes than the divalent ions. It also forms stronger complexes with oxygen-donor ligands than with nitrogen-donor ligands. deferoxamine, a naturally occurring siderophore produced by the actinobacter Streptomyces pilosus and was used initially as a chelation therapy agent. Synthetic siderophores such as deferiprone and deferasirox have been developed, using the known structure of deferoxamine as a starting point.[4][5] Chelation occurs with the two oxygen atoms.

Wilson's disease is caused by a defect in copper metabolism which results in accumulation of copper metal in various organs of the body. The target ion in this case is divalent, Cu2+. This ion is classified as borderline in the scheme of Ahrland, Chatt and Davies.[6] This means that it forms roughly equally strong complexes with ligands whose donor atoms are N, O or F as with ligands whose donor atoms are P, S or Cl. Penicillamine, which contains nitrogen and sulphur donor atoms, is used as this type of ligand binds more strongly to copper ions than to calcium and magnesium ions.

Treatment of poisoning by heavy metals such as lead and mercury is more problematical, because the ligands used do not have high specificity relative to calcium. For example, EDTA may be administered as a calcium salt to reduce the removal of calcium from bone together with the heavy metal. Factors determining selectivity for lead against zinc, cadmium and calcium have been reviewed,[7]

Chromatography

In column chromatography a mixture of substances is dissolved in a mobile phase and passed over a stationary phase in a column. A selectivity factor is defined as the ratio of distribution coefficients, which describe the equilibrium distribution of an analyte between the stationary phase and the mobile phase. The selectivity factor is equal to the selectivity coefficient with the added assumption that the activity of the stationary phase, the substrate in this case, is equal to 1, the standard assumption for a pure phase.[8] The resolution of a chromatographic column, RS is related to the selectivity factor by:

where α is selectivity factor, N is the number of theoretical plates kA and kB are the retention factors of the two analytes. Retention factors are proportional to distribution coefficients. In practice substances with a selectivity factor very close to 1 can be separated. This is particularly true in gas-liquid chromatography where column lengths up to 60 m are possible, providing a very large number of theoretical plates.

In ion-exchange chromatography the selectivity coefficient is defined in a slightly different way[9]

Solvent extraction

Solvent extraction[10] is used to extract individual lanthanoid elements from the mixtures found in nature in ores such as monazite. In one process, the metal ions in aqueous solution are made to form complexes with tributylphosphate (TBP), which are extracted into an organic solvent such as kerosene. Complete separation is effected by using a countercurrent exchange method. A number of cells are arranged as a cascade. After equilibration, the aqueous component of each cell is transferred to the previous cell and the organic component is transferred to the next cell, which initially contains only water. In this way the metal ion with the most stable complex passes down the cascade in the organic phase and the metal with the least stable complex passes up the cascade in the aqueous phase.[11]

If solubility in the organic phase is not an issue, a selectivity coefficient is equal to the ratio of the stability constants of the TBP complexes of two metal ions. For lanthanoid elements which are adjacent in the periodic table this ratio is not much greater than 1, so many cells are needed in the cascade.

Chemical sensors

Types of Chemosensors. (1.) Indicator-spacer-receptor (ISR) (2.) Indicator-Displacement Assay (IDA)

A potentiometric selectivity coefficient defines the ability of an ion-selective electrode to distinguish one particular ion from others. The selectivity coefficient, KB,C is evaluated by means of the emf response of the ion-selective electrode in mixed solutions of the primary ion, B, and interfering ion, C (fixed interference method) or less desirably, in separate solutions of B and C (separate solution method).[12] For example, a potassium ion-selective membrane electrode utilizes the naturally occurring macrocyclic antibiotic valinomycin. In this case the cavity in the macrocyclic ring is just the right size to encapsulate the potassium ion, but too large to bind the sodium ion, the most likely interference, strongly.

Chemical sensors,[13][14] are being developed for specific target molecules and ions in which the target (guest) form a complex with a sensor (host). The sensor is designed to be an excellent match in terms of the size and shape of the target in order to provide for the maximum binding selectivity. An indicator is associated with the sensor which undergoes a change when the target forms a complex with the sensor . The indicator change is usually a colour change (gray to yellow in the illustration) seen in absorbance or, with greater sensitivity, luminescence. The indicator may be attached to the sensor via a spacer, in the ISR arrangement, or it may be displaced from the sensor, IDA arrangement.

See also

Notes

  1. ^ The constant used here are association constants. Dissociation constants are used in some contexts. A dissociation constant is the reciprocal of an association constant.
  2. ^ The term "ligand" here refers to binding to a metal. In the definition of selectivity coefficient this "ligand" is in fact the substrate and ligand in that definition is the metal ion.

References

  1. ^ Klotz, I.M. (1997). Ligand-Receptor Energetics: A Guide for the Perplexed. Wiley. ISBN 978-0-471-17626-8.
  2. ^ Foreman, J.C.; Johansen, T., eds. (2003). Textbook of receptor pharmacology (2nd. ed.). Boca Raton, Fla.: CRC Press. ISBN 978-0-8493-1029-4.
  3. ^ Walker, M.; Shah, H.H. (1997). Everything you should know about chelation therapy (4th ed.). New Canaan, Conn.: Keats Pub. ISBN 978-0-87983-730-3.
  4. ^ Iron-Selective Chelators With Therapeutic Potential in Hider, Robert C.; Kong, Xiaole (2013). "Chapter 8. Iron: Effect of Overload and Deficiency". In Astrid Sigel, Helmut Sigel and Roland K. O. Sigel (ed.). Interrelations between Essential Metal Ions and Human Diseases. Metal Ions in Life Sciences. Vol. 13. Dordrecht: Springer. pp. 229–294. doi:10.1007/978-94-007-7500-8_8. ISBN 9789400774995. PMID 24470094.
  5. ^ Miller, Marvin J. (1989). "Syntheses and therapeutic potential of hydroxamic acid-based siderophores and analogs". Chemical Reviews. 89 (7): 1563–1579. doi:10.1021/cr00097a011.
  6. ^ Ahrland, S.; Chatt, J.; Davies, N.R. (1958). "The relative affinities of ligand atoms for acceptor molecules and ions". Quart. Rev. 12 (3): 265–276. doi:10.1039/QR9581200265.
  7. ^ Farkas, Etelka; Buglyó, Péter (2017). "Chapter 8. Lead(II) Complexes of Amino Acids, Peptides, and Other Related Ligands of Biological Interest". In Astrid, S.; Helmut, S.; Sigel, R. K. O. (eds.). Lead: Its Effects on Environment and Health. Metal Ions in Life Sciences. Vol. 17. Berlin, Boston: de Gruyter. pp. 201–240. doi:10.1515/9783110434330-008. ISBN 9783110434330. PMID 28731301.
  8. ^ Skoog, D.A; West, D.M.; Holler, J.F.; Crouch, S.R. (2004). Fundamentals of Analytical Chemistry (8th ed.). Thomson Brooks/Cole. ISBN 978-0-03-035523-3. Section 30E
  9. ^ IUPAC, Compendium of Chemical Terminology, 2nd ed. (the "Gold Book") (1997). Online corrected version: (2006–) "selectivity coefficient, kA/B in ion exchange chromatography". doi:10.1351/goldbook.S05566.html
  10. ^ Rice, N.M.; Irving, H. M. N. H.; Leonard, M.A (1993). "Nomenclature for liquid-liquid distribution (solvent extraction)". Pure Appl. Chem. 65 (11). IUPAC: 2373–2396. doi:10.1351/pac199365112373. S2CID 98514016.
  11. ^ Rydberg, J.; Musikas, C; Choppin, G.R., eds. (2004). Solvent Extraction Principles and Practice ( (2nd. ed.). Boca Raton, Fla.: CRC Press. ISBN 978-0-8247-5063-3.
  12. ^ Buck, R. P.; Linder, E. (1994). "Recommendations for nomenclature of ion-selective electrodes". Pure Appl. Chem. 66 (12). IUPAC: 2527–2536. doi:10.1351/Pac199466122527. S2CID 97126225.
  13. ^ Florinel-Gabriel Bănică, Chemical Sensors and Biosensors: Fundamentals and Applications, John Wiley and Sons, Chichester, 2012, Print ISBN 978-0-470-71066-1
  14. ^ Cattrall, R.W. (1997). Chemical sensors. Oxford University Press. ISBN 978-0-19-850090-2.

Read other articles:

Часть серии статей о Холокосте Идеология и политика Расовая гигиена · Расовый антисемитизм · Нацистская расовая политика · Нюрнбергские расовые законы Шоа Лагеря смерти Белжец · Дахау · Майданек · Малый Тростенец · Маутхаузен ·&...

 

 

Batik Solo TransSalah satu armada BSTDidirikan 1 September 2010 (layanan pertama)[1] 4 Juli 2020 (layanan Teman Bus)[2] LokalKota SurakartaWilayah layananKota Surakarta, Kabupaten Sukoharjo, Kabupaten Boyolali, dan Kabupaten KaranganyarJenis layananbus raya terpaduRute6 koridor utama, 6 koridor pengumpan (feeder)[1][3]Jenis bahan bakarBahan bakar minyak dieselBatik Solo Trans (BST) merupakan layanan bus raya terpadu yang beroperasi di Kota Surakarta. Layanan in...

 

 

NAGE redirects here. For the Indonesian people, see Nage. For the poaching liquor, see Nage (food). NAGENational Association of Government EmployeesFoundedJuly 16, 1961HeadquartersQuincy, MassachusettsLocationUnited StatesMembers 43,460[1]Key peopleDavid J. Holway, presidentAffiliationsSEIU, CtWWebsitewww.nage.org The National Association of Government Employees (NAGE) is a registered labor union with the United States Department of Labor representing approximately 43,000[2] m...

Subgenre of science fiction, sometimes with elements of science fantasy For the novel by Jack Vance, see The Dying Earth. For Vance's overarching series, see Dying Earth. Inner artwork depicting cities in flaming ruins, by an uncredited artist, for the short story Regeneration by Charles Dye and Katherine MacLean from Future Combined with Science Fiction Stories, September 1951. Fantasy Media Anime Art Artists Authors Comics Films Podcasts Literature Magazines Manga Publishers Light novels Te...

 

 

Un CH-37 Mojave durant la Guerre du Vietnam. Au second plan, un Vertol H-21 abattu. Le Sikorsky CH-37 Mojave (désignation constructeur : Sikorsky S-56) est un hélicoptère de transport lourd de l'armée de terre américaine des années 1950. C'est un des derniers gros hélicoptères à utiliser des moteurs à pistons, plus lourds et moins puissants que les turbines des modèles plus récents, ce qui explique sa carrière relativement courte : dès la fin des années 1960, il a ét...

 

 

Ukrainian colonel In this name that follows Eastern Slavic naming customs, the patronymic is Mikhailovich and the family name is Marchenko.Maksym MarchenkoМаксим МарченкоMarchenko in October 202015th Governor of Odesa OblastIn office1 March 2022 – 15 March 2023PresidentVolodymyr ZelenskyyPreceded bySerhiy HrynevetskySucceeded byBorys Voloshenkov (acting) Personal detailsBorn (1983-02-10) 10 February 1983 (age 41)Sloviansk, Ukrainian SSR, Soviet UnionNationali...

South Korean TV series or program Hur Jun, The Original StoryPromotional posterGenreHistorical drama Medical drama RomanceWritten byChoi Wan-kyuDirected byKim Geun-hong Kwon Sung-changStarringKim Joo-hyukPark Jin-heePark Eun-binNamkoong MinBaek Yoon-sikComposerHong Dong PyoCountry of originSouth KoreaOriginal languageKoreanNo. of episodes135ProductionExecutive producerShin Hyun-changProducerYoo Hyun JongRunning time35 minutesProduction companyMunhwa Broadcasting CorporationOriginal releaseNe...

 

 

Fljótsdalshreppur FljótsdalshreppurMunisipalitasNegara IslandiaRegionAusturlandLuas • Total1.516,3 km2 (5,854 sq mi)Populasi (2017) • Total76 • Kepadatan0,0.050/km2 (0,013/sq mi)LAU7505Situs webhttp://www.fljotsdalur.is/ Fljótsdalshreppur adalah salah satu munisipalitas di Islandia yang menjadi bagian region Austurland. Kode LAU munisipalitas ini adalah 7505. Menurut sensus 2017, jumlah penduduk munisipalitas yang luasnya 1....

 

 

AW101 (EH101) Merlin Bentuk dari AgustaWestland AW101 Jenis Transportasi laut, pencarian dan penyelamatan, maupun kendaraan terbang pribadi Negara asal  Britania Raya/ Italy Pembuat AgustaWestland HelicoptersAgustaWestlandFinmeccanicaLeonardo S.p.A.[1] Penerbangan perdana 9 Oktober 1987 Diperkenalkan 1999[2] Status masih Produksi Pengguna utama Royal NavyRoyal Air Force (sejarah) Italian Navy Royal Danish Air Force Dibuat 1990-sekarang Harga satuan € 28 juta ...

この項目には、一部のコンピュータや閲覧ソフトで表示できない文字が含まれています(詳細)。 数字の大字(だいじ)は、漢数字の一種。通常用いる単純な字形の漢数字(小字)の代わりに同じ音の別の漢字を用いるものである。 概要 壱万円日本銀行券(「壱」が大字) 弐千円日本銀行券(「弐」が大字) 漢数字には「一」「二」「三」と続く小字と、「壱」「�...

 

 

2022年夏威夷州联邦众议员选举 ← 2020年 2022年11月8日 2024年 → 夏威夷州的全部两个联邦众议员席位投票率46.4% ▼16.9 pp   多數黨 少數黨   政党 民主党 共和黨 上届结果 2 0 赢得席次 2 0 席次差额 ━ ━ 民選得票 270,737 123,288 得票率 67.83% 30.89% 得票变动 ▲ 0.45% ▲ 1.41% 2022年夏威夷州联邦众议员选举于2022年11月8日举行,旨在选出夏威夷州全部两个选区的联邦�...

 

 

La Lune. Le tourisme lunaire est la possible commercialisation de voyages sur la Lune mise à la disposition d'un public privé. Certaines startup de tourisme spatial prévoient d'offrir du tourisme sur ou autour de la Lune et estiment que cela sera possible entre 2023 et 2043[1],[2]. Les types Croquis de la trajectoire d'un trajet circumlunaire. Les vols touristiques seraient de trois types : survol sur une trajectoire circumlunaire, orbite lunaire et atterrissage lunaire. Coût Certain...

Hindu temple in Baranagar, India Kripamayee Kali Templeকৃপাময়ী কালী মন্দিরReligionAffiliationHinduismDistrictNorth 24 ParganasDeityKaliLocationLocationBaranagarStateWest BengalCountryIndiaLocation in West BengalGeographic coordinates22°39′18″N 88°21′28″E / 22.65500°N 88.35778°E / 22.65500; 88.35778ArchitectureTypeBengali architectureCreatorJai Narayan MitterCompleted1848 Kripamayee Kali Temple (Bengali: কৃপাম�...

 

 

Standing army of the historic Kingdom of Hanover The Flag of Hanover. The Hanoverian Army (German: Hannoversche Armee) was the standing army of the Electorate of Hanover from the seventeenth century onwards. From 1692 to 1803 it acted in defence of the electorate. Following the Hanoverian Succession of 1714, this was in conjunction with the British Army with which it shared a monarch. Hanoverian troops fought in the War of the Austrian Succession, Seven Years' War and American War of Independ...

 

 

هذه المقالة يتيمة إذ تصل إليها مقالات أخرى قليلة جدًا. فضلًا، ساعد بإضافة وصلة إليها في مقالات متعلقة بها. (مارس 2022) شاوشكا إلهة الحب والحرب والشفاء نقش بارز من يازيليكايا بالقرب من خاتوشا (بوغاز كوي) يصور شاوشكا. مركز العبادة الرئيسي نينوى الآباء أنو (وربما كوماربي)، أو كوشو...

Voce principale: Giochi della XXIX Olimpiade. Questa voce o sezione sugli argomenti Giochi olimpici e judo non cita le fonti necessarie o quelle presenti sono insufficienti. Puoi migliorare questa voce aggiungendo citazioni da fonti attendibili secondo le linee guida sull'uso delle fonti. Segui i suggerimenti del progetto di riferimento. Judo aPechino 2008 Uomini Donne   60 kg     48 kg   66 kg 52 kg 73 kg 57 kg 81 kg 63 kg 90 kg 70 kg 100 kg 78 kg +100 kg +78 kg Le ...

 

 

Assassinio di Rehavam Ze'eviattentatoIl Dan Jerusalem Hotel, ex Hyatt Hotel TipoAssassinio Data17 ottobre 20017:00 LuogoHotel Hyatt, Monte Scopus, Gerusalemme Stato Israele Coordinate31°47′48″N 35°14′09″E31°47′48″N, 35°14′09″E ResponsabiliIl Fronte Popolare per la Liberazione della Palestina rivendicò l'attentato[1] MotivazioneAssassinio di Abu Ali Mustafa[1][2] ConseguenzeMorti1 Modifica dati su Wikidata · Manuale Il ministro del turism...

 

 

Taça Libertadores da América de 1982 XXIII Copa Libertadores Copa Libertadores da América de 1982 Dados Participantes 21 Organização CONMEBOL Local de disputa América do Sul Período 7 de março – 30 de novembro Gol(o)s 163 Partidas 74 Média 2,2 gol(o)s por partida Campeão  Peñarol (4º título) Vice-campeão  Cobreloa Melhor marcador URU Fernando Morena (Peñarol) – 7 gols Melhor ataque (fase inicial)  Olimpia – 12 gols Melhor defesa (fase inicial)  River ...

Lt. Governor of Upper Canada (1836–1838) The Right HonourableSir Francis Bond HeadBt KCH6th Lieutenant Governor of Upper CanadaIn office1836–1838MonarchsWilliam IVVictoriaPreceded bySir John ColborneSucceeded bySir George Arthur Personal detailsBorn1 January 1793Higham, KentDied20 July 1875(1875-07-20) (aged 82)Croydon, Surrey, EnglandSpouseJulia Valenza SomervilleProfessionCommissioned Lieutenant in the Royal EngineersSignature Sir Francis Bond Head, 1st Baronet KCH PC (1 Januar...

 

 

Scientific study of earthquakes and propagation of elastic waves through a planet Animation of tsunami triggered by the 2004 Indian Ocean earthquake Part of a series onEarthquakes Types Mainshock Foreshock Aftershock Blind thrust Doublet Interplate Intraplate Megathrust Remotely triggered Slow Submarine Supershear Tsunami Earthquake swarm Causes Fault movement Volcanism Induced seismicity Characteristics Epicenter Epicentral distance Hypocenter Shadow zone Seismic waves P wave S wave Measurem...