Three Practical Essays on Baptism, Confirmation and Repentance (1699)
Some Reflections on that part of a book called Amyntor, or a Defence of Milton's Life, which relates to the Writings of the Primitive Fathers, and the Canon of the New Testament (1699)
A Paraphrase upon the Gospel of St Matthew (1701)
Paraphrases upon the Gospels of St Mark and St Luke (1702)
Being and Attributes of God (1704)
Evidences of Natural and Revealed Religion (1705)
A Discourse concerning the Being and Attributes of God, the Obligations of Natural Religion, and the Truth and Certainly of the Christian Revelation
Caesar's Commentaries (1712)
The Scripture Doctrine of the Trinity (1712)
"A Letter from Dr Clarke to Benjamin Hoadly, F.R.S., occasioned by the controversy relating to the Proportion of Velocity and Force in Bodies in Motion", julkaistu teoksessa Philosophical Transactions (1728)
An Exposition of the Church Catechism (julkaistu postuumisti, 1729)
Kokoelma saarnoja, 10 osaa (julkaistu postuumisti, 1729)
