List of biobanks
A biobank is a physical place which stores biological specimens . In some cases, participant data is also collected and stored. Access policies details may vary across biobanks but generally involve obtaining ethics approval from institutional review boards (IRB) and scientific review or peer review approval from the institutions under which the biobanks operate as well as Ethics approval from the institutions where the research projects will be undertaken. The samples and data are safeguarded so that researchers can use them in experiments deemed adequate. This article contains a list of biobanks.[citation needed ]
Classification
Biobanks can be classified in several ways. Some examples of how they can be classified is by their controlling entity (government, commercial enterprise, or private research institution), by their geographical location, or by what sorts of samples they collect.
Biobanks may be classified by purpose or design. Disease-oriented biobanks usually have a hospital affiliation through which they collect samples representing a variety of diseases, perhaps to look for biomarkers affiliated with disease.[ 1] Population-based biobanks need no particular hospital affiliation because they sample from large numbers of all kinds of people, perhaps to look for biomarkers for disease susceptibility in a general population.[ 2]
List of biobanks
Biobank
Affiliation
Focus
Type
Location
Founding
Notes
All of Us
Population
non-profit
United States
Autism Genetic Resource Exchange
Autism Speaks
Autism
non-profit
North America and Asia
Avon Longitudinal Study of Parents and Children
University of Bristol
non-profit
United Kingdom
1990
[ 3] [ 4]
BioBank Graz
Medical University of Graz
non-profit
Austria
[ 5]
Vilnius Santaros Klinikos Biobank
Vilnius University Hospital Santaros Klinikos
non-profit
Lithuania
BioBank Japan
RIKEN , University of Tokyo
Population, personalized medicine
non-profit
Japan
2003
[ 6]
Canadian Biosample Repository
University of Alberta
non-profit
Canada
CARTaGENE biobank
Centre hospitalier universitaire Sainte-Justine
non-profit
Quebec
2009
[ 7] [ 8]
Cooperative Human Tissue Network
Cancer
government
USA
1987
Coriell Institute for Medical Research
Genetic Disorders, rare diseases, Stem Cells
non-profit
United States
1953
DeCODE genetics
commercial
Iceland
[ 9]
Estonian Genome Project
University of Tartu
non-profit
Estonia
2000
EuroBioBank
Rare diseases
non-profit
Europe
FINBB
Population
non-profit
Finland
[ 10]
FinnGen
Population, disease focused
public-private
Finland
2017
[ 11]
Generation Scotland
NHS Scotland
government
Scotland
1999
[ 12] [ 13]
Genomics England
Rare diseases, cancer
public-private
England
2013
[ 14]
HUNT Biobank
Norwegian University of Science and Technology
non-profit
Norway
2002
Integrated Biobank of Luxembourg
Luxembourg Institute of Health
Cancer, immunology
Luxembourg
Interdisziplinäre Biomaterial- und Datenbank Würzburg
University of Würzburg & Universitätsklinikum Würzburg
public agency
Würzburg, Germany
2013
[ 15]
Kaiser Permanente Research Bank
Kaiser Permanente
Population
United States
2016[ 16]
[ 17]
Lifelines
University of Groningen & University Medical Centre Groningen
Healthy aging
non-profit
Groningen, The Netherlands
2006
Million Veterans Project
United States Department of Veterans Affairs
American veterans
non-profit
United States
[ 18]
MyCode
Geisinger Health System
Electronic health records, personalized medicine
commercial
Pennsylvania, United States
2007
[ 19]
nPOD
University of Florida , JDRF
Diabetes
non-profit
United States
2007
[ 20]
PATH Biobank
Breast cancer
non-profit
Germany
2002
Plasma Services Group
Autoimmune, Infectious, Coagulation, Diagnostics[ 21]
commercial
United States
2017
Sapien Biosciences
Apollo Hospitals & Saarum Innovations
Population, with special focus on tailoring treatment for Cancer
private
India (headquartered in Hyderabad)
2012
[ 22]
Signature biobank [fr ]
Research centre of the Montreal Mental Health Institute
Mental health
non-profit
Canada (Quebec)
2012
[ 23]
The Malaysian Cohort
National University of Malaysia
non-profit
Malaysia
2003
Tohoku Medical Megabank Project
Tohoku University , Iwate Medical University
Population, Birth and Three-Generation
non-profit
Japan
2012
[ 24] [ 25]
UK Biobank
non-profit
United Kingdom
2006
[ 26]
Biobank Sweden
Health and Social Care Inspectorate
Collaborative biobank infrastructure (nearly 250 biobanks)
government
Sweden
2017
[ 27] [ 28]
References
^ Bevilacqua, G.; Bosman, F.; Dassesse, T.; Höfler, H.; Janin, A.; Langer, R.; Larsimont, D.; Morente, M. M.; Riegman, P.; Schirmacher, P.; Stanta, G.; Zatloukal, K.; Caboux, E.; Hainaut, P. (2010). "The role of the pathologist in tissue banking: European Consensus Expert Group Report" . Virchows Archiv . 456 (4): 449– 454. doi :10.1007/s00428-010-0887-7 . PMC 2852521 . PMID 20157825 .
^ Riegman, P. H. J.; Morente, M. M.; Betsou, F.; De Blasio, P.; Geary, P.; Marble Arch International Working Group on Biobanking for Biomedical Research (2008). "Biobanking for better healthcare" . Molecular Oncology . 2 (3): 213– 222. doi :10.1016/j.molonc.2008.07.004 . PMC 5527804 . PMID 19383342 .
^ Boyd, A.; Golding, J.; Macleod, J.; Lawlor, D. A.; Fraser, A.; Henderson, J.; Molloy, L.; Ness, A.; Ring, S.; Davey Smith, G. (16 April 2012). "Cohort Profile: The 'Children of the 90s'--the index offspring of the Avon Longitudinal Study of Parents and Children" . International Journal of Epidemiology . 42 (1): 111– 127. doi :10.1093/ije/dys064 . PMC 3600618 . PMID 22507743 .
^ Levitt, Mairi (2011). "Relating to Participants: How Close Do Biobanks and Donors Really Want to Be?". Health Care Analysis . 19 (3): 220– 230. doi :10.1007/s10728-011-0193-9 . PMID 21915714 . S2CID 13953737 .
^ "About Biobank Graz" . Retrieved 2021-03-16 .
^ Nagai, Akiko; Hirata, Makoto; Kamatani, Yoichiro; Muto, Kaori; Matsuda, Koichi; Kiyohara, Yutaka; Ninomiya, Toshiharu; Tamakoshi, Akiko; Yamagata, Zentaro; Mushiroda, Taisei; Murakami, Yoshinori (March 2017). "Overview of the BioBank Japan Project: Study design and profile" . Journal of Epidemiology . 27 (3): S2 – S8 . doi :10.1016/j.je.2016.12.005 . PMC 5350590 . PMID 28189464 .
^ Awadalla, Philip; Catherine Boileau; Yves Payette; Youssef Idaghour; Jean-Philippe Goulet; Bartha Knoppers; Pavel Hamet; Claude Laberge (October 15, 2012). "Cohort profile of the CARTaGENE study: Quebec's population-based biobank for public health and personalized genomics" . International Journal of Epidemiology . 42 (5): 1285– 99. doi :10.1093/ije/dys160 . PMID 23071140 .
^ "Cartagene" . cartagene.qc.ca . Retrieved 3 April 2013 .
^ "From Genes to Drugs" . decode.com . deCODE genetics . Archived from the original on 2008-05-09. Retrieved 2008-05-04 .
^ "FinBioBank" . Retrieved 2019-11-23 .
^ "FinnGen-tutkimushanke vie suomalaiset löytöretkelle genomitietoon | Drupal" . finngen.fi . Retrieved 2019-11-23 .
^ Smith BH, Campbell H, Blackwood D, et al. (2006). "Generation Scotland: the Scottish Family Health Study; a new resource for researching genes and heritability" . BMC Medical Genetics . 7 : 74. doi :10.1186/1471-2350-7-74 . PMC 1592477 . PMID 17014726 .
^ Macleod AK, Liewald DC, McGilchrist MM, Morris AD, Kerr SM, Porteous DJ (February 2009). "Some principles and practices of genetic biobanking studies" . The European Respiratory Journal . 33 (2): 419– 25. doi :10.1183/09031936.00043508 . PMID 19181915 .
^ "Genomics England | 100,000 Genomes Project" . Retrieved 2019-11-23 .
^ "Interdisziplinäre Biomaterial- und Datenbank Würzburg" . ukw.de . Retrieved 2022-10-13 .
^ "Kaiser Permanente Research Bank Collects Genetic and Environmental Data to Improve Health and Care Delivery" . Kaiser Permanente. 11 April 2018.
^ "Kaiser Permanente Research Bank" . Kaiser Permanente. Retrieved 8 November 2018 .
^ Gaziano, John Michael; Concato, John; Brophy, Mary; Fiore, Louis; Pyarajan, Saiju; Breeling, James; Whitbourne, Stacey; Deen, Jennifer; Shannon, Colleen; Humphries, Donald; Guarino, Peter (February 2016). "Million Veteran Program: A mega-biobank to study genetic influences on health and disease" . Journal of Clinical Epidemiology . 70 : 214– 223. doi :10.1016/j.jclinepi.2015.09.016 . PMID 26441289 .
^ Carey, David J.; Fetterolf, Samantha N.; Davis, F. Daniel; Faucett, William A.; Kirchner, H. Lester; Mirshahi, Uyenlinh; Murray, Michael F.; Smelser, Diane T.; Gerhard, Glenn S.; Ledbetter, David H. (2016). "The Geisinger MyCode community health initiative: an electronic health record–linked biobank for precision medicine research" . Genetics in Medicine . 18 (9). Elsevier BV: 906– 913. doi :10.1038/gim.2015.187 . ISSN 1098-3600 . PMC 4981567 . PMID 26866580 .
^ "JDRF nPOD | Network for Pancreatic Organ Donors with Diabetes" . jdrfnpod.org . Retrieved 2016-09-22 .
^ "Plasma Services Group - The Difference is in The Data" . Plasma Services Group . Retrieved 2020-12-11 .
^ "Sapien Biosciences | Asia's first biobank led CDx & phenotypic drug discovery company" . Retrieved 2020-11-19 .
^ "Banque Signature | Accès aux données et aux biospécimens" . Banque Signature (in French). Retrieved 2023-03-27 .
^ "ToMMo | Tohoku Medical Megabank Organization" . ToMMo | Tohoku Medical Megabank Organization (in Japanese). 2015-02-10. Retrieved 2021-12-27 .
^ "IWATE TOHOKU MEDICAL MEGABANK ORGANIZATION" . IWATE TOHOKU MEDICAL MEGABANK ORGANIZATION (in Japanese). Retrieved 2022-01-05 .
^ "UK Biobank" . Retrieved 2019-11-23 .
^ "Guide to Biobanks in Sweden" (PDF) . biobanksverige.se . Retrieved 2023-03-03 .
^ "About Biobank Sweden" . biobanksverige.se . Retrieved 2023-03-03 .
External links
Databases
Sequence databases: GenBank , European Nucleotide Archive , DNA Data Bank of Japan and China National GeneBank
Secondary databases: UniProt , database of protein sequences grouping together Swiss-Prot , TrEMBL and Protein Information Resource
Other databases: BioNumbers , Protein Data Bank , Ensembl , InterPro , KEGG , and Gene Ontology
Specialised genomic databases: BOLD , Saccharomyces Genome Database , FlyBase , VectorBase , WormBase , Rat Genome Database , PHI-base , Arabidopsis Information Resource , GISAID and Zebrafish Information Network
Software Other Institutions Organizations Meetings File formats Related topics