| Group
|
Description
|
| Acd |
Acd file utilities
|
| Alignment consensus |
Merging sequences to make a consensus
|
| Alignment differences |
Finding differences between sequences
|
| Alignment dot plots |
Dot plot sequence comparisons
|
| Alignment global |
Global sequence alignment
|
| Alignment local |
Local sequence alignment
|
| Alignment multiple |
Multiple sequence alignment
|
| Display |
Publication-quality display
|
| Edit |
Sequence editing
|
| Enzyme kinetics |
Enzyme kinetics calculations
|
| Feature tables |
Manipulation and display of sequence annotation
|
| HMM |
Hidden markov model analysis
|
| Information |
Information and general help for users
|
| Menus |
Menu interface(s)
|
| Nucleic 2d structure |
Nucleic acid secondary structure
|
| Nucleic codon usage |
Codon usage analysis
|
| Nucleic composition |
Composition of nucleotide sequences
|
| Nucleic CpG islands |
CpG island detection and analysis
|
| Nucleic gene finding |
Predictions of genes and other genomic features
|
| Nucleic motifs |
Nucleic acid motif searches
|
| Nucleic mutation |
Nucleic acid sequence mutation
|
| Nucleic primers |
Primer prediction
|
| Nucleic profiles |
Nucleic acid profile generation and searching
|
| Nucleic repeats |
Nucleic acid repeat detection
|
| Nucleic restriction |
Restriction enzyme sites in nucleotide sequences
|
| Nucleic RNA folding |
RNA folding methods and analysis
|
| Nucleic transcription |
Transcription factors, promoters and terminator prediction
|
| Nucleic translation |
Translation of nucleotide sequence to protein sequence
|
| Phylogeny consensus |
Phylogenetic consensus methods
|
| Phylogeny continuous characters |
Phylogenetic continuous character methods
|
| Phylogeny discrete characters |
Phylogenetic discrete character methods
|
| Phylogeny distance matrix |
Phylogenetic distance matrix methods
|
| Phylogeny gene frequencies |
Phylogenetic gene frequency methods
|
| Phylogeny molecular sequence |
Phylogenetic molecular sequence methods
|
| Phylogeny tree drawing |
Phylogenetic tree drawing methods
|
| Protein 2d structure |
Protein secondary structure
|
| Protein 3d structure |
Protein tertiary structure
|
| Protein composition |
Composition of protein sequences
|
| Protein motifs |
Protein motif searches
|
| Protein mutation |
Protein sequence mutation
|
| Protein profiles |
Protein profile generation and searching
|
| Test |
Testing tools, not for general use
|
| Utils database creation |
Database installation
|
| Utils database indexing |
Database indexing
|
| Utils misc |
Utility tools
|
