Thermoplasmata

Thermoplasmata

Cuniculiplasma divulgatum
Scientific classification
Domain:	Archaea
Phylum:	Methanobacteriota
Class:	Thermoplasmata Reysenbach, 2002
Orders
"Aciduliprofundales" "Gimiplasmatales" "Halarchaeoplasmatales" "Lunaplasmatales" "Lutacidiplasmatales" Methanomassiliicoccales "Proteinoplasmatales" "Sysuiplasmatales" Thermoplasmatales "Yaplasmatales"
Synonyms
Picrophilea Cavalier-Smith 2002 "Thermoplasmatia" Oren, Parte & Garrity 2016 "Thermoplasmia" Cavalier-Smith 2020

In taxonomy, the Thermoplasmata are a class of the Euryarchaeota.^[1]

All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms growing at a minimum pH of 0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most members of Thermoplasmata are thermophilic.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[2] and National Center for Biotechnology Information (NCBI).^[1]

16S rRNA based LTP_06_2022^[3]^[4]^[5]

53 marker proteins based GTDB 09-RS220^[6]^[7]^[8]

Methanomassiliicoccales

Methanomassiliicoccaceae

Thermoplasmatales

Thermoplasmataceae

Thermogymnomonas

Cuniculiplasmataceae

	Picrophilaceae

	Ferroplasmataceae

	"Proteinoplasmatales" (SG8-5)

	"Yaplasmatales" [RBG-16-68-12]

"Gimiplasmatales"	"Gimiplasmataceae" (UA10834)

"Sysuiplasmatales"

"Sysuiplasmataceae"

Methanomassiliicoccales

	Methanomassiliicoccaceae

	Methanomethylophilaceae

"Halarchaeoplasmatales"	"Halarchaeoplasmataceae" (PWKY01)

"Lutacidiplasmatales"	"Lutacidiplasmataceae" (GCA_022750295)

"Aciduliprofundales"	"Aciduliprofundaceae"

Thermoplasmatales	Thermoplasmataceae

See also

List of Archaea genera

References

^ ^a ^b Sayers; et al. "Thermoplasmata". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2015-08-20.
^ J.P. Euzéby. "Thermoplasmata". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2015-08-20.
^ "The LTP". Retrieved 10 May 2023.
^ "LTP_all tree in newick format". Retrieved 10 May 2023.
^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "ar53_r220.sp_label". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.

Further reading

Scientific journals

Li, Chao Lun; Jiang, Yun Tao; Liu, Da Li; Qian, JieLei; Liang, Jing Ping; Shu, Rong (August 2014). "Prevalence and quantification of the uncommon Archaea phylotype Thermoplasmata in chronic periodontitis". Archives of Oral Biology. 59 (8): 822–828. doi:10.1016/j.archoralbio.2014.05.011. PMID 24859768.
Poulsen, Morten; Schwab, Clarissa; Jensen, Bent Borg; Engberg, Ricarda M.; Spang, Anja; Canibe, Nuria; Hojberg, Ole (June 2013). "Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen". Nature Communications. 4 (1428): 1947. Bibcode:2013NatCo...4.1947P. doi:10.1038/ncomms2847.
Cavalier-Smith, T (2002). "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification". Int. J. Syst. Evol. Microbiol. 52 (Pt 1): 7–76. doi:10.1099/00207713-52-1-7. PMID 11837318.
Woese, CR; Kandler O; Wheelis ML (1990). "Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya". Proc. Natl. Acad. Sci. USA. 87 (12): 4576–4579. Bibcode:1990PNAS...87.4576W. doi:10.1073/pnas.87.12.4576. PMC 54159. PMID 2112744.

Scientific books

Reysenbach, AL (2001). "Class IV. Thermoplasmata class. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.
Garrity GM; Holt JG (2001). "Phylum AII. Euryarchaeota phy. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.

External links

Prokaryotes: Archaea classification

(major groups

Mesomycetozoea)

Euryarchaeota
(Methanobacteriati)

"Hadarchaeota"	"Hadarchaeia" "Hadarchaeales" "Persephonarchaeia"
"Hydrothermarchaeota"	"Hydrothermarchaeia" "Hydrothermarchaeles"
Methanobacteriota	Methanobacteria Methanobacteriales Methanococci Methanococcales Methanopyri Methanopyrus "Theionarchaeia" Thermococci "Methanofastidiosales" Thermococcales
Halobacteriota	Archaeoglobia Archaeoglobales "Mnemosynellales" Halobacteria Halobacteriales Halorutilales "Hikarchaeia" "Hikarchaeales" Methanocellia Methanocellales "Methanoliparia" "Methanoliparales" Methanomicrobia Methanomicrobiales Methanonatronarchaeia Methanonatronarchaeales Methanosarcinia Methanosarcinales Methanotrichales "Ordosarchaeia" "Ordosarchaeales" "Syntropharchaeia" "Alkanophagales" "Syntropharchaeales"
Thermoplasmatota	"Izemarchaea" "Thermoprofundales" "Poseidoniia" "Poseidoniales" Thermoplasmata "Aciduliprofundales" "Gimiplasmatales" "Halarchaeoplasmatales" "Lunaplasmatales" "Lutacidiplasmatales" Methanomassiliicoccales "Sysuiplasmatales" Thermoplasmatales

DPANN
(Nanobdellati)

"Aenigmatarchaeota"
- "Aenigmatarchaeia"
"Altarchaeota"
- "Altarchaeia"
"Iainarchaeota"
- "Iainarchaeia"
"Huberarchaeota"
- "Huberarchaeia"
"Micrarchaeota"
- "Micrarchaeia"
Microcaldota
- Microcaldia
Nanobdellota
- Nanobdellia
"Nanohalarchaeota"
- "Nanohalarchaeia"
- "Nanohalobiia"
"Undinarchaeota"
- "Undinarchaeia"

Proteoarchaeota

TACK
(Thermoproteati)

Thermoproteota	JANJXX01 "Panguiarchaeales" Korarchaeia "Korarchaeales" Bathyarchaeia "Bathyarchaeales" "Hecatellales" Nitrososphaeria "Caldarchaeales" Conexivisphaerales "Geothermarchaeales" Nitrososphaerales "Methanomethylicia" "Culexarchaeles" "Methanomethylicales" "Nezhaarchaeales" "Sulfolobia" "Marsarchaeales" Sulfolobales Thermoproteia "Gearchaeales" Thermofilales Thermoproteales

Asgardarchaeota
(Promethearchaeati)

Promethearchaeota	"Asgardarchaeia" "Baldrarchaeia" "Hermodarchaeia" "Jordarchaeia" Promethearchaeia "Helarchaeales" Promethearchaeales Odinarchaeia Thorarchaeia
Heimdallarchaeota	Heimdallarchaeia "Gerdarchaeales" "Heimdallarchaeales" "Hodarchaeales" "Kariarchaeales" "Njordarchaeia" "Sifarchaeia" "Borrarchaeales" "Sifarchaeales" "Tyrarchaeia" "Wukongarchaeia"

Source:
Alternative views: Wikispecies

Taxon identifiers
Thermoplasmata	Wikidata: Q1135456 Wikispecies: Thermoplasmata CoL: JS EoL: 7922 EPPO: 1THRPC GBIF: 295 iNaturalist: 152095 IRMNG: 1464 ITIS: 951433 LPSN: thermoplasmata NCBI: 183967 Open Tree of Life: 921398 WoRMS: 416268

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