Micromonosporaceae

Micromonosporaceae
Actinoplanes utahensis on agar plate
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Micromonosporales
Genilloud 2015[1]
Family: Micromonosporaceae
Krasil'nikov 1938 (Approved Lists 1980)
Type genus
Micromonospora
Ørskov 1923 (Approved Lists 1980)
Genera

See text.

Synonyms

Synonyms of Micromonosporales

  • Actinocatenisporales Salam et al. 2020
  • Phytomonosporales Salam et al. 2020
  • Actinoplanetales corrig. Cavalier-Smith 2002
  • Micromonosporineae Stackebrandt et al. 1997

Synonyms of Micromonosporaceae

  • Actinoplanetaceae corrig. Couch 1955
  • Phytomonosporaceae Salam et al. 2020
  • Actinocatenisporaceae Salam et al. 2020

Micromonosporaceae is a family of bacteria of the class Actinomycetia. They are gram-positive, spore-forming soil organisms that form a true mycelium.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[3]

Whole-genome based phylogeny[4][a]
16S rRNA based LTP_08_2023[5][6][7] 120 marker proteins based GTDB 08-RS214[8][9][10]
Micromonosporales
Phytomonosporaceae

Actinorhabdospora Mingma et al. 2016

Phytomonospora Li et al. 2011

Glycomycetaceae

Stackebrandtia species-group 2

Stackebrandtia Labeda & Kroppenstedt 2005

Natronoglycomyces Sorokin et al. 2021

Salilacibacter Li et al. 2016b

Haloglycomyces Guan et al. 2009

Salininema corrig. Nikou et al. 2015

Glycomyces Labeda et al. 1985

Micromonosporaceae

Longispora Matsumoto et al. 2003

Micromonospora~6

Pilimelia Kane 1966

Planosporangium Wiese et al. 2008

Polymorphospora Tamura et al. 2006

Micromonospora pisi

Micromonospora~5

Luedemannella Ara and Kudo 2007

Hamadaea Ara et al. 2008

Allorhizocola Sun et al. 2019

Catelliglobosispora Ara et al. 2008

Rhizocola Matsumoto et al. 2014

Allocatelliglobosispora Lee and Lee 2011

Catellatospora Asano and Kawamoto 1986

Rugosimonospora Monciardini et al. 2009

Virgisporangium corrig. Tamura et al. 2001

Dactylosporangium Thiemann et al. 1967

Phytohabitans Inahashi et al. 2010

Phytohabitans houttuyneae

Asanoa Lee and Hah 2002

Catenuloplanes Yokota et al. 1993

Mangrovihabitans Liu et al. 2017

Actinoplanes~1

Couchioplanes caeruleus azureus

Krasilnikovia Ara and Kudo 2007

Jidongwangia Jia et al. 2013 ex Han et al. 2023

Nucisporomicrobium Han et al. 2022

Couchioplanes Tamura et al. 1994

Pseudosporangium Ara et al. 2008

Actinoplanes Couch 1950

Micromonospora Ørskov 1923 (incl. Plantactinospora; Salinispora; Spirilliplanes)

Micromonosporaceae
s.l.

Genera incertae sedis:

  • "Solwaraspora" Magarvey et al. 2004[11]

Notes

  1. ^ Actinorhabdospora, Allocatelliglobosispora, Allorhizocola, Catellatospora, Couchioplanes, Krasilnikovia, Luedemannella, Mangrovihabitans, Phytohabitans, Phytomonospora, Pilimelia, Planosporangium, Plantactinospora, Polymorphospora, Rhizocola, Rugosimonospora, Spirilliplanes, and Virgisporangium are not included in this phylogenetic tree.

See also

References

  1. ^ Genilloud O (2012). "Order XI Micromonosporales ord. nov.". In Goodfellow M, Kämpfer P, Trujillo ME, Suzuki K, Ludwig W, Whitman WB (eds.). Bergey's Manual of Systematic Bacteriology. Vol. 5 (2nd ed.). New York: Springer. p. 1035.
  2. ^ Euzéby JP, Parte AC. "Micromonosporaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 17, 2022.
  3. ^ Sayers; et al. "Micromonosporales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-12-20.
  4. ^ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
  5. ^ "The LTP". Retrieved 20 November 2023.
  6. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  7. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  11. ^ Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH (2004). "Isolation and Characterization of Novel Marine-Derived Actinomycete Taxa Rich in Bioactive Metabolites". Applied and Environmental Microbiology. 70 (12): 7520–7529. Bibcode:2004ApEnM..70.7520M. doi:10.1128/AEM.70.12.7520-7529.2004. PMC 535209. PMID 15574955.
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