Stratford STEM Magnet High School has two academies, each with distinct pathways. Students are required to select a pathway by the 10th grade.
Academy of Science and Engineering (A.S.E.)
Interdisciplinary Science Pathway
Engineering Pathway
Biotechnology Pathway
Academy of National Security and the Science of Teaching (N.S.S.T.)
National Security Technology Pathway (Criminal Justice/Forensic Science)
The Science of Teaching Pathway
(Changed in the 2020–21 school year, The NSST Academy was formally the Academy of National Security and Safety Technologies which included Criminal Justice/Forensic Science and Computer Simulation/Game Programming Pathways. The Computer Simulation/Game Programming Pathways were cut due to funding issues)
Advanced Academics
Stratford STEM is designated as a International Cambridge School. In addition, Stratford STEM offers numerous Advanced Placement (AP) courses and dual credit options.[citation needed]