He was then given unanimous support to continue; though Flanagan asked for a two-year term, this was not granted as county bye-laws had it that the manager must be ratified every year.[7]
The year 2011 proved to be a great improvement as Weatmeath qualified all the way to promotion to Division 3 where the faced Leinster finalists Louth. The game turned out to be very tense as both teams performed well; however, Louth ran out winners by a scoreline Louth 1-15 Westmeath 0-13. 2013 proved to be the best success as The Lake County gained promotion to Division 1 for the first time since 2008 despite narrowly losing to opponents Derry. Flanagan's team were then throttled by Dublin in the Championship, prompting the manager to express concern about the ever increasing gulf opening up between counties.[8]
In September 2013, the Westmeath County Board informed Flanagan that he would be let go from his post due lack of achievements.[9] Flanagan said he was confused by the actions of the Westmeath County Board as he had achieved promotion to Division 1 and been told that he had been given a two-year extension as manager the previous year, only to then be told while on holiday that he would have to interview to continue in the role.[10]
Sligo
On 25 November 2013, Flanagan was ratified for one term as manager of the Sligo senior team, succeeding Kevin Walsh.[11][12]
Offaly
On 30 October 2014, Flanagan was ratified as manager of both the Offaly senior and under-21 teams.[13][14]
Flanagan's wife informed him that he had been sacked as Offaly manager in 2017 after she saw it posted on Twitter.[15][16][17]
Padraig Pearses
Flanagan took control of Roscommon GAA club Padraig Pearses in 2018.
^"Flanagan ratified as new Offaly manager". Hogan Stand. 30 October 2014. Pat Flanagan was ratified as the new Offaly senior and U21 football manager at a special county board meeting tonight.
^"Pat Flanagan to guide Offaly football forward". RTÉ. 31 October 2014. Pat Flanagan was ratified as Offaly senior and under-21 football manager at a meeting of the county board on Thursday night.