Bolton went on to attend Mississippi College in Clinton, Mississippi, where he played college football from 1987 to 1990.[3] Back then, the Choctaws were competing at the NCAADivision II level and won the National Championship in 1989 against Jacksonville State.[4] Bolton contributed with 62 receptions (a school record) for 1,012 yards and 11 touchdowns.[3][5] He was named Gulf South Conference (GSC) offensive player of the week twice that year and earned first team all-conference honors while leading the GSC in points scored with 90.[6] However, Mississippi College's football tournament participation, along with its NCAA Division II national football championship, were later vacated by the NCAA Committee on infractions for recruiting violations.[7] He finished his collegiate career ranked second in school history with 129 receptions, fourth with 1,733 receiving yards, and first with 19 touchdown receptions.[3] In August 1996, Bolton was named to the GSC Team of the Quarter Century (1971–1995).[6][8]