Halopiger
Genus of archaea
Halopiger is a genus of archaeans in the family Natrialbaceae [ 1] that have high tolerance to salinity.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[ 2] and National Center for Biotechnology Information (NCBI).[ 1]
16S rRNA based LTP _06_2022[ 3] [ 4] [ 5]
53 marker proteins based GTDB 08-RS214[ 6] [ 7] [ 8]
Halopiger
H. goleimassiliensis Hassani et al. 2016
H. salifodinae Zhang et al. 2013
H. djelfimassiliensis Hassani et al. 2016
Halopiger
Halopiger djelfimassiliensis
Species formerly placed in this taxon
See also
References
^ a b Sayers; et al. "Halopiger" . National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-06-05 .
^ J.P. Euzéby. "Halopiger" . List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17 .
^ "The LTP" . Retrieved 10 May 2023 .
^ "LTP_all tree in newick format" . Retrieved 10 May 2023 .
^ "LTP_06_2022 Release Notes" (PDF) . Retrieved 10 May 2023 .
^ "GTDB release 08-RS214" . Genome Taxonomy Database . Retrieved 10 May 2023 .
^ "ar53_r214.sp_label" . Genome Taxonomy Database . Retrieved 10 May 2023 .
^ "Taxon History" . Genome Taxonomy Database . Retrieved 10 May 2023 .
^ Gutierrez, M. C.; Castillo, A. M.; Kamekura, M.; Xue, Y.; Ma, Y.; Cowan, D. A.; Jones, B. E.; Grant, W. D.; Ventosa, A. (2007). "Halopiger xanaduensis gen. nov., sp. nov., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China" . International Journal of Systematic and Evolutionary Microbiology . 57 (7): 1402– 1407. doi :10.1099/ijs.0.65001-0 . ISSN 1466-5026 . PMID 17625165 .
^ Hezayen, F. F.; Gutierrez, M. C.; Steinbüchel, A.; Tindall, B. J.; Rehm, B. H. A. (2009). "Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil" . International Journal of Systematic and Evolutionary Microbiology . 60 (3): 633– 637. doi :10.1099/ijs.0.013078-0 . ISSN 1466-5026 . PMID 19654343 .
^ Minegishi, Hiroaki; Shimogaki, Ryuta; Enomoto, Shigeaki; Echigo, Akinobu; Kondo, Yusuke; Nagaoka, Shuhei; Shimane, Yasuhiro; Kamekura, Masahiro; Itoh, Takashi; Ohkuma, Moriya; Nunoura, Takuro; Takai, Ken; Usami, Ron (2016). "Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt" . International Journal of Systematic and Evolutionary Microbiology . 66 (12): 4975– 4980. doi :10.1099/ijsem.0.001455 . ISSN 1466-5026 . PMID 27562780 .
^ Zhang, W.-Y.; Meng, Y.; Zhu, X.-F.; Wu, M. (2013). "Halopiger salifodinae sp. nov., an extremely halophilic archaeon isolated from a salt mine". International Journal of Systematic and Evolutionary Microbiology . 63 (Pt 10): 3563– 3567. doi :10.1099/ijs.0.050971-0 . ISSN 1466-5026 . PMID 23563233 .
Further reading
Scientific journals
Ikram, HI; Catherine, R; Caroline, M; Didier, R; Hocine, H; Christelle, D (15 June 2014). "Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp. nov" . Standards in Genomic Sciences . 9 (3): 956– 9. doi :10.4056/sigs.4618288 . PMC 4149028 . PMID 25197441 .
Gutiérrez MC, Castillo AM, Kamekura M, Xue Y, Ma Y, Cowan DA, Jones BE, Grant WD, Ventosa A (2007). "Halopiger xanaduensis gen. nov., sp., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China" . Int. J. Syst. Evol. Microbiol . 57 (Pt 7): 1402– 1407. doi :10.1099/ijs.0.65001-0 . PMID 17625165 .
Oren A, Ventosa A (2000). "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia" . Int. J. Syst. Evol. Microbiol . 50 (3): 1405– 1407. doi :10.1099/00207713-50-3-1405 . PMID 10843089 .
Hezayen, F.F.; Gutiérrez, M.C.; Steinbüchel, A.; Tindall, B.J.; Rehm, B.H.A. (2010). "Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil" (PDF) . Int. J. Syst. Evol. Microbiol . 60 (3): 633– 637. doi :10.1099/ijs.0.013078-0 . PMID 19654343 .
Scientific books
Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". In RE Buchanan; NE Gibbons (eds.). Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.