18 crews entered in two heats. The top three finishers from both heats advanced directly to the finals. Fourth through seventh-place finishers in each heat along with the fastest eighth-place finisher advanced to the semifinal.
Wallechinsky, David and Jaime Loucky (2008). "Canoeing: Men's Kayak Pairs 1000 Meters". In The Complete Book of the Olympics: 2008 Edition. London: Aurum Press, Limited. p. 476.