The Order of Merit was based on tournament results during the season, calculated using a points-based system.[2] The top five players on the Order of Merit (not otherwise exempt) earned status to play on the 2013 Challenge Tour.[3]
^The number in brackets after each winner's name is the number of Alps Tour events they had won up to and including that tournament. It is rare for someone to accumulate many wins on the Alps Tour as success at this level usually leads to promotion to the Challenge Tour.
^"Bernadet remporte le Masters 13 Allianz" [Bernadet wins Masters 13 Allianz] (in French). Fédération Française de Golf. 4 November 2012. Archived from the original on 16 November 2012. Retrieved 8 April 2023. Notez enfin que Jérôme Lando Casanova rejoint Thomas Fournier dans le top 5 du ranking final de l'Alps Tour et évoluera donc l'an prochain sur le Challenge Tour. [Finally, note that Jérôme Lando Casanova joins Thomas Fournier in the top 5 of the final ranking of the Alps Tour and will therefore evolve next year on the Challenge Tour.]