On August 23, Copenhagen qualified for the UEFA Champions League as the first Danish team since 1998 after eliminating Ajax 3–2 on aggregate. In the group stage, they finished last in their group despite earning seven points.
In the Superliga they were at the winter break placed first, with only one defeat and four draws after 18 matches. Their biggest wins was with 3–0 against Viborg FF and Vejle Boldklub at Parken on respectively 22 and October 29.
The only autumn defeat was against Aalborg BK on August 27, where they lost 2–0 at Parken.
On 5 May 2007 they got their second defeat, again against Aalborg BK at Parken. That match ended 1–2. Their final loss was 19 days later against Esbjerg fB home with 1–2.
In the Danish Cup, Copenhagen began in the third round against Thisted FC at Lerpytter Stadion. Copenhagen won 4–1 on penalty shootout following a 1–1 draw after full-time. Hjalte Nørregaard scored for FCK and Daniel Kristensen scored for Thisted.
In the fourth round, Copenhagen played at home against Esbjerg fB, winning 3–1. Former FCK player Jesper Bech scored for Esbjerg after four minutes, but Fredrik Berglund and Hjalte Nørregaard scored the three goals for FCK in front of 10,000 spectators at Parken Stadium.
In the semi-finals the opponent was 1st Division leaders Lyngby Boldklub. The first match at Lyngby Stadion ended with a 3–2 win for FCK, where Berglund had scored twice, and Nørregaard score 6 minutes before full-time. The second leg at Parken was a display of skills as FCK won 4–0; Aílton José Almeida, Fredrik Berglund and Hjalte Nørregaard scored for FCK, while the goal for 2–0 was an own goal by Lyngby debutant Brian Hämäläinen.
In the finalOdense Boldklub was waiting, and Michael Hemmingsen's troops showed that FCK still had a hangover after the championship was secured 8 days earlier. The match ended 1–2, although Atiba Hutchinson made it 1–0 for FCK after 15 minutes.
In the third qualifying round, Dutch side Ajax Amsterdam was waiting, but after a strong start, FCK lost 1–2 at home ground Parken Stadium, after goals by Ajax's Klaas-Jan Huntelaar (twice) and FCK's Brede Hangeland. In the return match at Amsterdam ArenA on August 23 FC Copenhagen turned the tie around by defeating Ajax 0–2, including an own goal by Thomas Vermaelen, and thereby qualifying for the UEFA Champions League group stage with a 3–2 aggregate scoreline.
The first group stage match were against Benfica at Parken Stadium. That match ended with a 0–0 draw. The second match were played at Celtic Park against Celtic, who won 1–0. The goal was scored on a penalty kick. In the third match they played, they lost 3–0 to Manchester United at Old Trafford. They however went on to beat Manchester United 1–0 in the fourth match, thanks to a Marcus Allbäck goal. Copenhagen lost their hope on further European matches at Estádio da Luz against Benfica where the match was closed after only 16 minutes where Benfica came in front 2–0, in a match that ended 3–1. Allbäck scored Copenhagen's goal in the 89th minute.
Their most successful and least important match was the last, where they beat Celtic by 3 to 1 at Parken, after goals by Atiba Hutchinson, Jesper Grønkjær and Marcus Allbäck.
F.C. Copenhagen lost in the 2007 Royal League Final, after Martin Ericsson scored on a penalty shoot for Brøndby at Brøndby Stadion. This was the only goal in the quite boring final. For the first time, FCK did not win the Royal League.
Squads
The following squads, are lists with all the players, who have played in FC København in the 2006-07 season.
First team
Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply. Players may hold more than one non-FIFA nationality.
Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply. Players may hold more than one non-FIFA nationality.