Teams were divided into 3 groups of 3 teams each. The teams would play against each other on a home-and-away basis. The 2 group winners with the best record would qualify. The group winner with the worst record would advance to the CONMEBOL / OFC Intercontinental Play-off.
Draw
The draw for the qualifying groups took place in Zürich, Switzerland on 12 December 1987. During the draw teams were drawn from 3 seeded pots into the 3 qualifying groups.
1The match was abandoned in the 67th minute with Brazil leading 1–0 after Chile walked off the field when a firecracker thrown from the crowd supposedly hit goalkeeper Roberto Rojas in the head, leaving him bloodied and having to be carried from the pitch on a stretcher; a subsequent FIFA investigation found that Rojas's injury was self-inflicted, using a razor blade concealed in his glove. On 13 September, the match was awarded 2–0 to Brazil, and Chile were banned from qualifying for the next World Cup. Rojas was given a lifetime ban from competitive football (lifted in 2001), as was Chile manager Orlando Aravena, vice-captain Fernando Astengo and team doctor Daniel Rodriguez.
^The Chile–Venezuela match was played on neutral ground in Argentina instead of in Chile because Chile was penalised for rioting during the Chile vs Brazil match.
