Daeschler, E. B. and N. H. Shubin. 1998. Fish with Fingers?. Nature 391:133.
Daeschler, E. B. 2000. An early actinopterygian fish from the Upper Devonian Catskill Formation in Pennsylvania, USA. Proceedings of the Academy of Natural Sciences 150:181-192.
Daeschler, E. B. 2000. Early tetrapod jaws from the Late Devonian of Pennsylvania, USA. Journal of Paleontology 74(2):301-308.
Ahlberg, P. E., Z. Johanson, and E. B. Daeschler. 2001. The Late Devonian lungfish Soederberghia (Sarcopterygii, Dipnoi) from Australia and North America, and its biogeographic implications. Journal of Vertebrate Paleontology 21(1):1-12.
Davis, M., N. H. Shubin, E. B. Daeschler. 2001. Immature rhizodontids from the Devonian of North America. Bulletin of the Museum of Comparative Zoology 156(1):171-187.
Downs, J.P. and E.B. Daeschler. 2001. Variation within a large sample of Ageleodus pectinatus teeth (Chondichthyes) from the Late Devonian of Pennsylvania, U.S.A. Journal of Vertebrate Paleontology 21(4):811-814.
Daeschler, E. B., A. Frumes and C. F. Mullison. 2003. Groenlandaspidid placoderm fishes from Late Devonian of North America. Records of the Australian Museum.55(1):45-60.
Shubin, N. H., E. B. Daeschler and M. I. Coates. 2004. The early evolution of the tetrapod humerus. Science 304(5667):90-93.
Davis, M., N. H. Shubin, and E. B. Daeschler. 2004. A new specimen of Sauripterus taylori (Sarcopterygii; Osteichthyes) from the Famennian Catskill Formation of North America. Journal of Vertebrate Paleontology 24(1):26-40.
Wilson, H. M., E. B. Daeschler and S. Desbiens. 2005. New flat-backed archipolypodan millipedes from the Upper Devonian of North America. Journal of Paleontology 79(4):737-743.
Friedman, M. and E. B. Daeschler. 2006. Late Devonian (Famennian) lungfishes from the Catskill Formation of Pennsylvania, USA. Palaeontology 49(6):1-17.
Shubin, N. H., E. B. Daeschler and F.A. Jenkins, Jr. 2006. The pectoral fin of Tiktaalik roseae and the origin of the tetrapod limb. Nature 440:764-771.
Daeschler, E. B., N. H. Shubin and F. A. Jenkins, Jr. 2006. A Devonian tetrapod-like fish and the evolution of the tetrapod body plan. Nature 440:757-763.
Downs, J. P., E.B. Daeschler, F. A. Jenkins, Jr, and N. H. Shubin. 2008. The cranial endoskeleton of Tiktaalik roseae. Nature 445:925-929.
Daeschler, E. B., J. A. Clack, and N. H. Shubin. 2009. Late Devonian tetrapod remains from Red Hill, Pennsylvania, USA: how much diversity?. Acta Zoologica 90:306-317.