Signaling Gateway (website)

Signaling Gateway is a web portal dedicated to signaling pathways powered by the San Diego Supercomputer Center at the University of California, San Diego. It was initiated[1] by a collaboration between the Alliance for Cellular Signaling and Nature. A primary feature is the Molecule Pages database.

Molecule Pages Database (online database journal)

Signaling Gateway Molecule Pages is a database containing "essential information on more than 8000 mammalian proteins (Mouse and Human) involved in cellular signaling."[2][3][4]

The content of molecule pages is authored by invited experts and is peer-reviewed. The published pages are citable by digital object identifiers (DOIs). All data in the Molecule Pages are freely available to the public.

Data can be exported to PDF, XML, BioPAX/SBPAX and SBML.

MIRIAM Registry Details.[5]

Some Published Molecule Pages

  • Robitaille, Aaron; Hall, Michael (2008). "MTOR". AfCS-Nature Molecule Pages. doi:10.1038/mp.a000094.01.
  • Takemaru, Ken-Ichi (2006). "Catenin, beta". AfCS-Nature Molecule Pages. doi:10.1038/mp.a000506.01.
  • Rousseau, Simon (2011). "P38 alpha MAP kinase". AfCS-Nature Molecule Pages. doi:10.1038/mp.a001717.01.
  • Katoh, Masaru (2008). "Frizzled 7". AfCS-Nature Molecule Pages. doi:10.1038/mp.a000965.01.

References

  1. ^ Alison Abbott (2002). "Alliance for cellular signaling: Into unknown territory". Nature. 420 (6916): 600–601. Bibcode:2002Natur.420..600A. doi:10.1038/420600a. PMID 12478259. S2CID 4428387.
  2. ^ Dinasarapu AR, Saunders B, Ozerlat I, Azam K, Subramaniam S (2011). "Signaling gateway molecule pages - a data model perspective". Bioinformatics. 27 (12): 1736–1738. doi:10.1093/bioinformatics/btr190. PMC 3106186. PMID 21505029.
  3. ^ Brian Saunders; Stephen Lyon; Matthew Day; Brenda Riley; Emily Chenette; Shankar Subramaniam (2008). "The Molecule Pages database". Nucleic Acids Research. 36 (suppl 1) (Database issue): D700 – D706. doi:10.1093/nar/gkm907. PMC 2238911. PMID 17965093.
  4. ^ Joshua Li; Yuhong Ning; Warren Hedley; Brian Saunders; Yongsheng Chen; Nicole Tindill; Timo Hannay; Shankar Subramaniam (2002). "The Molecule Pages database". Nature. 420 (6916): 716–717. Bibcode:2002Natur.420..716L. doi:10.1038/nature01307. PMID 12478304.
  5. ^ SGMP as part of MIRIAM Registry