Israeli Professor
Nir Friedman (born 1967) is an Israeli Professor of Computer Science and Biology at the Hebrew University of Jerusalem .[ 3] [ 4]
His research combines Machine Learning and Statistical Learning with Systems Biology , specifically in the fields of Gene Regulation , Transcription and Chromatin .
Education and research
Friedman earned his B.Sc degree from Tel Aviv University (1987) and his M.Sc from the Weizmann Institute of Science (1992).[ 5] In 1997, he completed his Ph.D. at Stanford under the supervision of Joseph Halpern , in the field of Artificial Intelligence .[ 6]
After some postdoctoral work at the University of California, Berkeley , he accepted a faculty position at the School of Computer Science,[ 7] the Hebrew University of Jerusalem .
His highly cited research[ 8] [ 9] includes work on Bayesian network classifiers[ 10] (with Danny Geiger and Moises Goldszmidt ), Bayesian Structural EM,[ 11] and the use of Bayesian methods to analyzing gene expression data[ 12] [ 13] [ 14] [ 15] (with Aviv Regev , Dana Pe'er , Eran Segal , Daphne Koller and David Botstein ). More recent works focus on Probabilistic Graphical Models , reconstructing Regulatory Networks , Genetic Interactions , and the role of Chromatin in Transcriptional Regulation (with Oliver Rando )[ 16]
In 2009, Friedman and Koller published a textbook on Probabilistic Graphical Models .[ 17] Later that year, he joined the Institute of Life Sciences,[ 18] and opened an experimental lab where he uses advanced robotic tools to study transcriptional regulation in the yeast Saccharomyces cerevisiae .[ 19]
References
^ "Nir Friedman - Yad Hanadiv" . Yadhanadiv.org.il . Archived from the original on 25 June 2016. Retrieved 25 May 2016 .
^ "Young HU biologist wins Australian award" . The Jerusalem Post - JPost.com . Retrieved 25 May 2016 .
^ "Nir Friedman" . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ "Nir Friedman's Lab" . Systemsbio.cs.huji.ac.il . Retrieved 25 May 2016 .
^ "Curriculum Vitae—Nir Friedman" (PDF) . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ "Archived copy" . Archived from the original on April 25, 2012. Retrieved October 22, 2011 .{{cite web }}
: CS1 maint: archived copy as title (link )
^ "The Rachel and Selim Benin School of Computer Science and Engineering" . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ "nir friedman - Google Scholar" . Scholar.google.com . Retrieved 25 May 2016 .
^ Search Results for author Friedman N on PubMed .
^ "Bayesian network classifiers" . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ "The Bayesian structural EM algorithm" . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ Friedman, N.; Linial, M.; Nachman, I.; Pe'er, D. (2000). "Using Bayesian Networks to Analyze Expression Data". Journal of Computational Biology . 7 (3–4): 601–620. CiteSeerX 10.1.1.191.139 . doi :10.1089/106652700750050961 . PMID 11108481 .
^ Segal, E.; Shapira, M.; Regev, A.; Pe'er, D.; Botstein, D.; Koller, D.; Friedman, N. (2003). "Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data". Nature Genetics . 34 (2): 166–176. doi :10.1038/ng1165 . PMID 12740579 . S2CID 6146032 .
^ Friedman, N. (2004). "Inferring Cellular Networks Using Probabilistic Graphical Models". Science . 303 (5659): 799–805. Bibcode :2004Sci...303..799F . doi :10.1126/science.1094068 . PMID 14764868 . S2CID 6819971 .
^ Segal, E.; Friedman, N.; Koller, D.; Regev, A. (2004). "A module map showing conditional activity of expression modules in cancer" . Nature Genetics . 36 (10): 1090–1098. doi :10.1038/ng1434 . PMC 2271138 . PMID 15448693 .
^ "Nir Friedman" . Cs.huji.ac.il . Retrieved 25 May 2016 .
^ Daphne Koller and Nir Friedman (2009). Probabilistic Graphical Models . MIT Press. ISBN 978-0-262-01319-2 .
^ "The Alexander Silberman Institute of Life Sciences" . Bio.huji.ac.il . Archived from the original on 2016-04-26. Retrieved 2016-05-25 .
^ "Robotic Facility" . Systemsbio.cs.huji.ac.il . Retrieved 25 May 2016 .
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