HIST1H4L
Protein-coding gene in the species Homo sapiens
H4C13 Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4H9O , 3WKJ , 3AYW , 3WA9 , 5B0Z , 5AVB , 2CV5 , 5AV5 , 3AV2 , 3WTP , 3AV1 , 3AZK , 3X1V , 5AV8 , 1F66 , 4QUU , 3CFS , 4YYK , 4QUT , 3NQJ , 3A6N , 3W99 , 5AVC , 2RS9 , 3F9Z , 3QZT , 3QBY , 3W97 , 4M38 , 4YM6 , 3CFV , 4HGA , 1EQZ , 2RJE , 3QZV , 1HQ3 , 4H9P , 3AZL , 3AFA , 1TZY , 3UVY , 5CPK , 3JPX , 4U9W , 4N3W , 4YYJ , 4YYD , 4H9N , 4H9R , 3AZI , 4LD9 , 3UVX , 3AZH , 5BNX , 4N4F , 1U35 , 4YYG , 3O36 , 2ARO , 5AV9 , 4H9S , 3AZF , 3W98 , 4GQB , 4H9Q , 5BNV , 3WAA , 3AZG , 3AZE , 2RNY , 1ZKK , 2QQS , 2LVM , 3X1T , 3AN2 , 2KWO , 3QZS , 3F9W , 5FFW , 5CPJ , 3F9X , 3IJ1 , 4YM5 , 3AZJ , 4YY6 , 3AZN , 2IG0 , 4YYH , 4YYI , 5CPI , 3W96 , 3R45 , 2KWN , 3F9Y , 5AV6 , 3AZM , 5BO0 , 3X1S , 4QYD , 4KGC , 3UVW , 4YYN , 3X1U , 3UW9 , 2F8N , 3NQU , 5B0Y , 4YYM , 5C3I , 4Z5T , 5B24 , 5FA5 , 4Z2M , 5E5A , 5FWE , 5B2I , 5B40 , 5B2J , 5JA4 , 5AY8 , 4ZUX
Identifiers Aliases H4C13 , H4.k, H4/k, H4FK, histone cluster 1, H4l, histone cluster 1 H4 family member l, HIST1H4L, H4 clustered histone 13, H4C5, H4C4, H4C9, H4C12, H4-16, H4C3, H4C11, H4C1, H4C14, H4C15, H4C8, H4C6, H4C2External IDs OMIM : 602831 ; MGI : 4843992 ; HomoloGene : 136248 ; GeneCards : H4C13 ; OMA :H4C13 - orthologs Wikidata
Histone H4 is a protein that in humans is encoded by the HIST1H4L gene .[ 5] [ 6] [ 7] [ 8]
Function
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes . Two molecules of each of the four core histones (H2A , H2B , H3 , and H4 ) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes . The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the small histone gene cluster on chromosome 6p22-p21.3.[ 8]
References
^ a b c GRCh38: Ensembl release 89: ENSG00000275126 – Ensembl , May 2017
^ a b c GRCm38: Ensembl release 89: ENSMUSG00000069305 – Ensembl , May 2017
^ "Human PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
^ "Mouse PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
^ Albig W, Meergans T, Doenecke D (Mar 1997). "Characterization of the H1.5 gene completes the set of human H1 subtype genes". Gene . 184 (2): 141– 8. doi :10.1016/S0378-1119(96)00582-3 . PMID 9031620 .
^ Albig W, Doenecke D (Feb 1998). "The human histone gene cluster at the D6S105 locus". Hum Genet . 101 (3): 284– 94. doi :10.1007/s004390050630 . PMID 9439656 . S2CID 38539096 .
^ Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ (Oct 2002). "The human and mouse replication-dependent histone genes". Genomics . 80 (5): 487– 98. doi :10.1016/S0888-7543(02)96850-3 . PMID 12408966 .
^ a b "Entrez Gene: HIST1H4L histone cluster 1, H4l" .
Further reading
Lusic M, Marcello A, Cereseto A, Giacca M (2004). "Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter" . EMBO J . 22 (24): 6550– 61. doi :10.1093/emboj/cdg631 . PMC 291826 . PMID 14657027 .
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences" . Proc. Natl. Acad. Sci. U.S.A . 99 (26): 16899– 903. Bibcode :2002PNAS...9916899M . doi :10.1073/pnas.242603899 . PMC 139241 . PMID 12477932 .
Deng L, Wang D, de la Fuente C, et al. (2001). "Enhancement of the p300 HAT activity by HIV-1 Tat on chromatin DNA" . Virology . 289 (2): 312– 26. doi :10.1006/viro.2001.1129 . PMID 11689053 .
Deng L, de la Fuente C, Fu P, et al. (2001). "Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones" . Virology . 277 (2): 278– 95. doi :10.1006/viro.2000.0593 . PMID 11080476 .
El Kharroubi A, Piras G, Zensen R, Martin MA (1998). "Transcriptional Activation of the Integrated Chromatin-Associated Human Immunodeficiency Virus Type 1 Promoter" . Mol. Cell. Biol . 18 (5): 2535– 44. doi :10.1128/mcb.18.5.2535 . PMC 110633 . PMID 9566873 .
PDB gallery
1aoi : Complex between nucleosome core particle (H3,H4,H2A,H2B) and 146 BP long DNA fragment
1eqz : X-Ray structure of the nucleosome core particle at 2.5 Å resolution
1f66 : 2.6 A crystal structure of a nucleosome core particle containing the variant histone H2A.Z
1hq3 : Crystal Structure of the Histone-Core-Octamer in KCl/phosphate
1id3 : Crystal Structure of the Yeast Nucleosome Core Particle Reveals Fundamental Differences in Inter-Nucleosome Interactions
1kx3 : X-Ray Structure of the Nucleosome Core Particle, NCP146, at 2.0 A Resolution
1kx4 : X-Ray Structure of the Nucleosome Core Particle, NCP146b, at 2.6 A Resolution
1kx5 : X-Ray Structure of the Nucleosome Core Particle, NCP147, at 1.9 A Resolution
1m18 : Ligand binding alters the structure and dynamics of nucleosomal DNA
1m19 : Ligand binding alters the structure and dynamics of nucleosomal DNA
1m1a : Ligand binding alters the structure and dynamics of nucleosomal DNA
1p34 : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3a : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3b : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3f : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3g : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3i : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3k : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3l : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3m : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3o : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1p3p : Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
1s32 : Molecular Recognition of the Nucleosomal 'Supergroove'
1tzy : Crystal Structure of the Core-Histone Octamer to 1.90 Angstrom Resolution
1u35 : Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
1zbb : Structure of the 4_601_167 Tetranucleosome
1zla : X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core
2aro : Crystal Structure of the Native Histone Octamer to 2.1 Angstrom Resolution, Crystallised in the Presence Of S-Nitrosoglutathione
2cv5 : Crystal structure of human nucleosome core particle
2f8n : 2.9 Angstrom X-ray structure of hybrid macroH2A nucleosomes
2fj7 : Crystal structure of Nucleosome Core Particle Containing a Poly (dA.dT) Sequence Element
2hio : Histone Octamer (chicken), Chromosomal Protein
2hue : Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4
2io5 : Crystal structure of the CIA- histone H3-H4 complex
2nzd : Nucleosome core particle containing 145 bp of DNA