31 January: HJK kicked off their 20th League Cup campaign with a 1 - 0 win over IFK Mariehamn. HJK eventually finished third in Group B, however, remained unbeaten throughout the campaign.
12 February: Jarno Parikka announced his retirement from football due to a knee injury.
19 March: HJK started their 62nd Finnish Cup edition with a 3 - 1 victory over FC Honka/Akatemia and advanced to the sixth round.
30 June: HJK started their 2016–17 UEFA Europa League campaign with a 0 - 2 away win against Lithuanian side FK Atlantas. A week later HJK went through to the next qualifying round after beating Atlantas 3 - 1 on aggregate.
24 September: HJK were beaten on penalties in the 2016 Finnish Cup Final by SJK, who were crowned Finnish Cup Champions for the first time in club history. Alfredo Morelos was the top scorer of the competition with 7 goals in 4 matches.
23 October: HJK finished runners-up in the 2016 Veikkausliiga season with 58 points from 33 matches. Alfredo Morelos was the top scorer for HJK with 16 league goals and a total of 30 goals in all competitions.
Source: Veikkausliiga(in Finnish), Soccerway Rules for classification: 1) Points; 2) Goal difference; 3) Goals scored; 4) Head-to-head points; 5) Head-to-head goal difference; 6) Head-to-head away goals scored; 7) Play-off (Note: Play-off is only played if need to decide champion, teams for relegation or UEFA competition and will be played on a neutral ground). (C) Champions Notes:
Updated to match(es) played on 18 February 2016. Source: veikkausliiga.com Rules for classification: 1) points; 2) goal difference; 3) number of goals scored; 4) head-to-head points; 5) head-to-head goal difference; 6) goals scored in head-to-head